Protein ZmMADS43
ZmMADS43 is a protein in the MADS family.
Information
TF Name: ZmMADS43
Species: Maize
TF Family: MADS
Gene Name(Synonym): MADS43
Uniprot ID: B4FKK2
Subgenome: 2

Protein ZmMADS43

ZmMADS43 is a protein in the MADS family.

Overview of domains present in v5 transcripts
PF00319PF01486
Zm00001eb361790_T003
Zm00001eb361790_T001
Zm00001eb361790_T002

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d011748DAPseq no logo sequence fimo position
Zm00001d011748DAPseq no logo sequence fimo position
Zm00001d011748ChIPseq no logo sequence fimo position
Zm00001d011748PChIPseq no logo sequence fimo position

Interactions where ZmMADS43 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmMADS43 is the target  
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There are 14 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb361790_T003 from maize genome v5

Amino Acid Sequence
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MGRGRSEIKRIENPTQRQSTFYKRRDGLFKKARELSVLCDVDLLLLLFSTSGKLYHYLSPTVPSVKDLVERYEATTHTKV
WTDIRQERRAELEKAEQMCELMEKELRVMTVDDGEQYTVPSLELLEHSLEAAVRKVRSEKDRKIGGEINYLENIIRGRHE
ERYGLCNKLAHSQASNNEGGGGSTPPSSGLELKLGTPTWIHQTTVFST

MGRGRSEIKRIENPTQRQSTFYKRRDGLFKKARELSVLCDVDLLLLLFSTSGKLYHYLSPTVPSVKDLVERYEATTHTKV
WTDIRQERRAELEKAEQMCELMEKELRVMTVDDGEQYTVPSLELLEHSLEAAVRKVRSEKDRKIGGEINYLENIIRGRHE
ERYGLCNKLAHSQASNNEGGGGSTPPSSGLELKLGTPTWIHQTTVFST

MGRGRSEIKRIENPTQRQSTFYKRRDGLFKKARELSVLCDVDLLLLLFSTSGKLYHYLSPTVPSVKDLVERYEATTHTKV
WTDIRQERRAELEKAEQMCELMEKELRVMTVDDGEQYTVPSLELLEHSLEAAVRKVRSEKDRKIGGEINYLENIIRGRHE
ERYGLCNKLAHSQASNNEGGGGSTPPSSGLELKLGTPTWIHQTTVFST

MGRGRSEIKRIENPTQRQSTFYKRRDGLFKKARELSVLCDVDLLLLLFSTSGKLYHYLSPTVPSVKDLVERYEATTHTKV
WTDIRQERRAELEKAEQMCELMEKELRVMTVDDGEQYTVPSLELLEHSLEAAVRKVRSEKDRKIGGEINYLENIIRGRHE
ERYGLCNKLAHSQASNNEGGGGSTPPSSGLELKLGTPTWIHQTTVFST

MGRGRSEIKRIENPTQRQSTFYKRRDGLFKKARELSVLCDVDLLLLLFSTSGKLYHYLSPTVPSVKDLVERYEATTHTKV
WTDIRQERRAELEKAEQMCELMEKELRVMTVDDGEQYTVPSLELLEHSLEAAVRKVRSEKDRKIGGEINYLENIIRGRHE
ERYGLCNKLAHSQASNNEGGGGSTPPSSGLELKLGTPTWIHQTTVFST

MGRGRSEIKRIENPTQRQSTFYKRRDGLFKKARELSVLCDVDLLLLLFSTSGKLYHYLSPTVPSVKDLVERYEATTHTKV
WTDIRQERRAELEKAEQMCELMEKELRVMTVDDGEQYTVPSLELLEHSLEAAVRKVRSEKDRKIGGEINYLENIIRGRHE
ERYGLCNKLAHSQASNNEGGGGSTPPSSGLELKLGTPTWIHQTTVFST

MGRGRSEIKRIENPTQRQSTFYKRRDGLFKKARELSVLCDVDLLLLLFSTSGKLYHYLSPTVPSVKDLVERYEATTHTKV
WTDIRQERRAELEKAEQMCELMEKELRVMTVDDGEQYTVPSLELLEHSLEAAVRKVRSEKDRKIGGEINYLENIIRGRHE
ERYGLCNKLAHSQASNNEGGGGSTPPSSGLELKLGTPTWIHQTTVFST

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF00319
PF01486
PF00319
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Nucleotide Sequence
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ATCTTCTCCCCCATGCCGGAAGCTC...

GRMZM2G001139_T01 from maize genome v3

Amino Acid Sequence
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MGRGRSEIKRIENPTQRQSTFYKRRDGLFKKARELSVLCDVDLLLLLFSTSGKLYHYLSPTVPSVKDLVERYEATTHTKV
WTDIRQERRAELEKAEQMCELMEKELRVMTVDDGEQYTVPSLELLEHSLEAAVRKVRSEKDRKIGGEINYLENIIRGRHE
ERYGLCNKLAHSQASNNEGGGGSTPPSSGLELKLGTPTWIHQTTVFST

Nucleotide Sequence
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CCCTCCAATTTTTAAGGGGTTTGAG...

GRMZM2G001139_T02 from maize genome v3


Related TFome: pUT3464

Amino Acid Sequence
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MGRGRSEIKRIENPTQRQSTFYKRRDGLFKKARELSVLCDVDLLLLLFSTSGKLYHYLSPTVPSVKDLVERYEATTHTKV
WTDIRQERRAELEKAEQMCELMEKELRVMTVDDGEQYTVPSLELLEHSLEAAVRKVRSEKDRKIGGEINYLENIIRGRHE
ERYGLCNKLAHSQASNNEGGGGSTPPSSGLELKLGLN

Nucleotide Sequence
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CCCTCCAATTTTTAAGGGGTTTGAG...

GRMZM2G001139_T03 from maize genome v3

Amino Acid Sequence
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MGRGRSEIKRIENPTQRQSTFYKRRDGLFKKARELSVLCDVDLLLLLFSTSGKLYHYLSPTVPSVKDLVERYEATTHTKE
RRAELEKAEQMCELMEKELRVMTVDDGEQYTVPSLELLEHSLEAAVRKVRSEKDRKIGGEINYLENIIRGRHEERYGLCN
KLAHSQASNNEGGGGSTPPSSGLELKLGLN

Nucleotide Sequence
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CCCTCCAATTTTTAAGGGGTTTGAG...

Zm00001d011748_T001 from maize genome v4

Amino Acid Sequence
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MGRGRSEIKRIENPTQRQSTFYKRRDGLFKKARELSVLCDVDLLLLLFSTSGKLYHYLSPTVPSVKDLVERYEATTHTKV
WTDIRQERRAELEKAEQMCELMEKELRVMTVDDGEQYTVPSLELLEHSLEAAVRKVRSEKDRKIGGEINYLENIIRGRHE
ERYGLCNKLAHSQASNNEGGGGSTPPSSGLELKLGLN

Nucleotide Sequence
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ATCTTCTCCCCCATGCCGGAAGCTC...

Zm00001eb361790_T001 from maize genome v5

Amino Acid Sequence
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MGRGRSEIKRIENPTQRQSTFYKRRDGLFKKARELSVLCDVDLLLLLFSTSGKLYHYLSPTVPSVKDLVERYEATTHTKV
WTDIRQERRAELEKAEQMCELMEKELRVMTVDDGEQYTVPSLELLEHSLEAAVRKVRSEKDRKIGGEINYLENIIRGRHE
ERYGLCNKLAHSQASNNEGGGGSTPPSSGLELKLGLN

Nucleotide Sequence
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AACTCGACGCGGACTACAGTCTCTC...

Zm00001eb361790_T002 from maize genome v5

Amino Acid Sequence
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MGRGRSEIKRIENPTQRQSTFYKRRDGLFKKARELSVLCDVDLLLLLFSTSGKLYHYLSPTVPSVKDLVERYEATTHTKE
RRAELEKAEQMCELMEKELRVMTVDDGEQYTVPSLELLEHSLEAAVRKVRSEKDRKIGGEINYLENIIRGRHEERYGLCN
KLAHSQASNNEGGGGSTPPSSGLELKLGLN

Nucleotide Sequence
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ATCTTCTCCCCCATGCCGGAAGCTC...


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